Apple Cinnamon Greek Yogurt Muffins – Moist, High-Protein Muffins for Easy Breakfast Meal Prep
Samantha
These Apple Cinnamon Greek Yogurt Muffins are soft, moist, and bursting with cozy spice and real apple chunks. Made with protein-rich Greek yogurt, whole grain flour, and naturally sweetened with honey or maple syrup, they’re perfect for meal prep breakfasts, healthy snacks, or a kid-approved treat. Easy to freeze and reheat, with a gluten-free option included!
Prep Time 10 minutes mins
Cook Time 20 minutes mins
Total Time 30 minutes mins
Course Breakfast, Meal Prep, Snack
Cuisine American-Inspired
Servings 12 muffins
Calories 142 kcal
- 1 cup plain Greek yogurt nonfat or full-fat
- 2 medium apples peeled and finely diced
- 1 ½ cups whole wheat flour
- 2 large eggs
- ⅓ cup honey or maple syrup
- 2 tbsp olive oil
- 1 tsp baking soda
- ½ tsp baking powder
- 1 ½ tsp cinnamon
- ¼ tsp nutmeg
- 1 tsp vanilla extract
- Pinch of salt
Step 1: Preheat and PrepPreheat oven to 350°F (175°C). Line or grease a muffin tin. Step 2: Mix Wet IngredientsIn a large bowl, whisk Greek yogurt, eggs, honey, olive oil, and vanilla. Step 3: Combine Dry IngredientsIn a separate bowl, stir together flour, baking soda, baking powder, salt, cinnamon, and nutmeg. Step 4: Fold and FillAdd dry ingredients to the wet, mixing just until combined. Fold in diced apples. Spoon evenly into muffin tins. Step 5: Bake and CoolBake 18–22 minutes or until golden and a toothpick comes out clean. Cool for 5 minutes, then transfer to a rack.
Secret Tips for Apple Cinnamon Greek Yogurt Muffins
1. Use full-fat Greek yogurt for extra moisture: To make your high-protein muffins rich and tender, opt for full-fat Greek yogurt. It adds creaminess, boosts protein, and keeps these apple cinnamon muffins moist without needing extra oil or butter.
2. Grate the apple finely for better texture: Instead of large chunks, use a fine grater to shred your apple. This lets the apple melt into the batter, keeping each muffin naturally sweet and ultra-moist—perfect for a healthy breakfast muffin that doesn’t taste “healthy.”
3. Don’t overmix the batter: Stir the ingredients just until combined. Overmixing can make your Greek yogurt muffins dense and tough. Gentle folding keeps them light, fluffy, and bakery-style in texture.
4. Add oats or almond flour for fiber and structure: Boost the nutrition and balance the moisture from the apples by folding in a tablespoon of oats or almond flour. It helps bind the muffins and makes them more satisfying for meal prep breakfasts.
5. Sprinkle cinnamon sugar on top before baking: For a golden, slightly crisp muffin top, add a pinch of cinnamon sugar before baking. It brings out the warm spice flavor and gives your apple cinnamon muffins that classic muffin bakery vibe.
6. Store smart for meal prep: These muffins keep best in the fridge in an airtight container lined with paper towels to prevent sogginess. They also freeze well—just reheat for 15 seconds for a warm, protein-packed breakfast on the go.
7. Add protein powder to boost macros: Want to make these apple muffins more filling? Stir in a scoop of unflavored or vanilla protein powder. Just reduce the flour slightly to balance the texture and avoid drying them out.Keyword apple cinnamon greek yogurt muffins, breakfast muffin with greek yogurt, dairy free apple muffins, gluten free greek yogurt muffins, greek yogurt baking recipe, healthy greek yogurt muffins, high protein apple muffins, low sugar cinnamon muffins, meal prep muffins with apples, oil free apple muffins
